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Table 2 Genotype quality control indicators

From: Association between Common Genetic Variants in the Opioid Pathway and Smoking Behaviors in Chinese Men

Gene Genotype identifier Chromosome position Function Minor allele frequency (minor allele) p-value#
     HapMap-CHB Study population  
ARRB2 rs3786047 4615098 intron 0.161 (A) 0.153 (A) 0.34
ARRB2 rs1045280 4622638 synonymous 0.167 (C) 0.155 (C) 0.30
ARRB2 rs2036657 4625159 3' near gene 0.117 (G) 0.155 (G) 0.59
HINT1 rs3852209 130496015 intron 0.225 (T) 0.211 (T) 0.73
HINT1 rs2278060 130500751 intron 0.250 (C) 0.225 (C) 0.94
OPRM1 rs1799971 154360797 missense 0.361 (G) 0.307 (G) 1
  1. #Calculated by using χ 2 test (deviation from Hardy–Weinberg conditions).