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Table 2 Haplotype analyses of KIAA0319 region using 2- or 3-markers sliding windows in association with categorical DD

From: A common haplotype of KIAA0319 contributes to the phonological awareness skill in Chinese children

Haplotypes Frequency Global p-values Individual haplotype test Adjusted P value
  OR (95% CI) p-values Permutation (1000)
rs3756821- rs9366577 C-T 0.791 0.0625 1 0.0495  
T-T 0.168 0.5323 (0.1866 – 1.519) 0.2568
T-C 0.040 0.3874 (0.1499 – 1.001) 0.0442
rs4504469 rs2038137 rs2143340 T-T-G 0.668 0.3579 0.3703 (0.0906 – 1.513) 0.4093  
T-T-C 0.137 0.2569 (0.05752 – 1.148) 0.1736  
A-G-G 0.077 0.2598 (0.05393 – 1.251) 0.3173  
C-G-G 0.065 0.6415 (0.1436 – 2.866) 0.2752  
A-C-G 0.033 1   
A-G-C 0.014 0.1851 (0.02041 – 1.68) 0.4142  
Sliding window       
2-markers       
rs9366577- rs2038139 C-A 0.041 0.0305 1 0.0116 0.3656
T-A 0.832 0.2667 (0.0885 – 0.8035) 0.3173
T-C 0.127 0.2333 (0.0669 – 0.8134) 0.6547
rs6915373-rs9467239 C-C 0.337 0.0375 1 0.3832
C-G 0.202 1.7480 (1.013 – 3.016) 0.0528
T-C 0.061 2.4560 (0.9815 – 6.145) 0.0878
T-G 0.401 0.9833 (0.6372 – 1.517) 0.1215
3-markers       
rs9366577-rs2038139-rs2038137 C-A-G 0.040 0.02347 5 (1.447 – 17.27) 0.0047 0.3397
T-A-G 0.788 1 0.2041
T-A-T 0.053 1.265 (0.4706 – 3.402) 0.6171
T-C-T 0.110 0.7706 (0.374 – 1.588) 0.3692
4-markers       
rs9366577-rs2038139-rs208137- rs3756821 C-A-G-T 0.041 0.0301 5.33 (1.535 – 18.53) 0.0047 0.4306
T-A-G-C 0.635 1 0.0330
T-A-G-T 0.156 1.654 (0.9109 – 3.005) 0.1489
T-A-T-C 0.042 1.809 (0.4949 – 6.614) 0.5271
  T-C-T-C 0.109   0.859 (0.4114 – 1.793) 0.3692