From: A common haplotype of KIAA0319 contributes to the phonological awareness skill in Chinese children
Haplotypes | Frequency | Global p-values | Individual haplotype test | Adjusted P value | ||
---|---|---|---|---|---|---|
OR (95% CI) | p-values | Permutation (1000) | ||||
rs3756821- rs9366577 | C-T | 0.791 | 0.0625 | 1 | 0.0495 | |
T-T | 0.168 | 0.5323 (0.1866 – 1.519) | 0.2568 | |||
T-C | 0.040 | 0.3874 (0.1499 – 1.001) | 0.0442 | |||
rs4504469 rs2038137 rs2143340 | T-T-G | 0.668 | 0.3579 | 0.3703 (0.0906 – 1.513) | 0.4093 | |
T-T-C | 0.137 | 0.2569 (0.05752 – 1.148) | 0.1736 | |||
A-G-G | 0.077 | 0.2598 (0.05393 – 1.251) | 0.3173 | |||
C-G-G | 0.065 | 0.6415 (0.1436 – 2.866) | 0.2752 | |||
A-C-G | 0.033 | 1 | ||||
A-G-C | 0.014 | 0.1851 (0.02041 – 1.68) | 0.4142 | |||
Sliding window | ||||||
2-markers | ||||||
rs9366577- rs2038139 | C-A | 0.041 | 0.0305 | 1 | 0.0116 | 0.3656 |
T-A | 0.832 | 0.2667 (0.0885 – 0.8035) | 0.3173 | |||
T-C | 0.127 | 0.2333 (0.0669 – 0.8134) | 0.6547 | |||
rs6915373-rs9467239 | C-C | 0.337 | 0.0375 | 1 | 0.3832 | |
C-G | 0.202 | 1.7480 (1.013 – 3.016) | 0.0528 | |||
T-C | 0.061 | 2.4560 (0.9815 – 6.145) | 0.0878 | |||
T-G | 0.401 | 0.9833 (0.6372 – 1.517) | 0.1215 | |||
3-markers | ||||||
rs9366577-rs2038139-rs2038137 | C-A-G | 0.040 | 0.02347 | 5 (1.447 – 17.27) | 0.0047 | 0.3397 |
T-A-G | 0.788 | 1 | 0.2041 | |||
T-A-T | 0.053 | 1.265 (0.4706 – 3.402) | 0.6171 | |||
T-C-T | 0.110 | 0.7706 (0.374 – 1.588) | 0.3692 | |||
4-markers | ||||||
rs9366577-rs2038139-rs208137- rs3756821 | C-A-G-T | 0.041 | 0.0301 | 5.33 (1.535 – 18.53) | 0.0047 | 0.4306 |
T-A-G-C | 0.635 | 1 | 0.0330 | |||
T-A-G-T | 0.156 | 1.654 (0.9109 – 3.005) | 0.1489 | |||
T-A-T-C | 0.042 | 1.809 (0.4949 – 6.614) | 0.5271 | |||
T-C-T-C | 0.109 | 0.859 (0.4114 – 1.793) | 0.3692 |