| SNP | Patient | Control | Crude OR (95%CI) | Unadjusted | Adjusted OR (95%CI) | Adjusted p-value | Bonferroni corrected p-value |
---|---|---|---|---|---|---|---|---|
rs2440390 | C Allele | 930 | 975 | 1 | Â | 1 | Â | Â |
T Allele | 36 | 45 | 0.8436(0.5432-1.31) | 0.4488 | 0.7823(0.4875-1.256) | 0.3091 | 1 | |
CC | 449 | 466 | 1 | Â | 1 | Â | Â | |
CT | 32 | 43 | 0.7724(0.4800-1.2427) | 0.2870905 | 0.7092(0.4247-1.1843) | 0.18903 | 1 | |
TT | 2 | 1 | 2.0757(0.1877-22.9491) | 0.5513879 | 1.8799(0.1540-22.9427) | 0.62095 | 1 | |
Dom | Â | Â | 0.802(0.5033-1.278) | 0.3533 | 0.7372(0.446-1.218) | 0.2342 | 1 | |
Rec | Â | Â | 2.116(0.1913-23.42) | 0.541 | 1.928(0.1574-23.6) | 0.6076 | 1 | |
rs1079727 | T Allele | 521 | 606 | 1 | Â | 1 | Â | Â |
C Allele | 445 | 414 | 1.254(1.048-1.501) | 0.01345 | 1.337(1.1-1.626) | 0.003592 | 0.0828 | |
TT | 143 | 174 | 1 | Â | 1 | Â | Â | |
CT | 235 | 258 | 1.10831(0.8350-1.4711) | 0.4765734 | 1.0949(0.8061-1.4871) | 0.561809 | 1 | |
CC | 105 | 78 | 1.6380(1.1347-2.3645) | 0.0084253 | 1.8827(1.2633-2.8059) | 0.001883 | 0.0437* | |
Dom | Â | Â | 1.231(0.9421-1.609) | 0.1277 | 1.269(0.9509-1.694) | 0.1056 | 1 | |
Rec | Â | Â | 1.538(1.113-2.127) | 0.009134 | 1.816(1.272-2.592) | 0.001017 | 0.023* | |
rs2002453 | T Allele | 476 | 539 | 1 | Â | 1 | Â | Â |
C Allele | 490 | 475 | 1.169(0.9793-1.396) | 0.0838 | 1.238(1.022-1.5) | 0.02946 | 0.6785 | |
TT | 123 | 136 | 1 | Â | 1 | Â | Â | |
CT | 230 | 267 | 0.9525(0.7049-1.2869) | 0.7511201 | 0.9340(0.6743-1.2938) | 0.681255 | 1 | |
CC | 130 | 104 | 1.3821(0.9692-1.9710) | 0.073918 | 1.5311(1.0454-2.2424) | 0.028655 | 0.6601 | |
Dom | Â | Â | 1.073(0.8079-1.425) | 0.6269 | 1.1(0.81-1.494) | 0.5414 | 1 | |
Rec | Â | Â | 1.427(1.063-1.916) | 0.01806 | 1.633(1.183-2.253) | 0.002867 | 0.0667 | |
rs2471851 | A Allele | 565 | 641 | 1 | Â | 1 | Â | Â |
C Allele | 399 | 377 | 1.205(1.004-1.446) | 0.04551 | 1.269(1.041-1.549) | 0.01864 | 0.4278 | |
AA | 165 | 198 | 1 | Â | 1 | Â | Â | |
AC | 235 | 245 | 1.1510(0.8757-1.5128) | 0.3131888 | 1.1008(0.8188-1.4799) | 0.524907 | 1 | |
CC | 82 | 66 | 1.4909(1.0151-2.1897) | 0.0416912 | 1.7458(1.1457-2.6601) | 0.009509 | 0.2185 | |
Dom | Â | Â | 1.223(0.9439-1.585) | 0.1276 | 1.225(0.9262-1.62) | 0.1548 | 1 | |
Rec | Â | Â | 1.376(0.9685-1.955) | 0.07486 | 1.67(1.134-2.459) | 0.009401 | 0.2162 | |
rs12800853 | C Allele | 921 | 959 | 1 | Â | 1 | Â | Â |
T Allele | 43 | 61 | 0.7304(0.4877-1.094) | 0.1276 | 0.723(0.4698-1.113) | 0.1403 | 1 | |
CC | 439 | 451 | 1 | Â | 1 | Â | Â | |
CT | 43 | 57 | 0.7750(0.5107-1.1762) | 0.2310594 | 0.7807(0.4999-1.2194) | 0.276544 | 1 | |
TT | 0 | 2 | NA | Â | NA | Â | Â | |
Dom | Â | Â | 0.7487(0.4947-1.133) | 0.1711 | 0.7476(0.4802-1.164) | 0.1978 | 1 | |
Rec | Â | Â | Â | Â | Â | Â | Â | |
rs17115583 | G Allele | 560 | 549 | 1 | Â | 1 | Â | Â |
A Allele | 406 | 459 | 0.8636(0.7207-1.035) | 0.1119 | 0.8382(0.6894-1.019) | 0.07648 | 1 | |
GG | 167 | 138 | 1 | Â | 1 | Â | Â | |
AG | 226 | 273 | 0.6841(0.5138-0.9108) | 0.009318 | 0.6686(0.4892-0.9138) | 0.01156 | 0.2668 | |
AA | 90 | 93 | 0.7997(0.5539-1.1545) | 0.2328118 | 0.7555(0.5102-1.1189) | 0.161701 | 1 | |
Dom | Â | Â | 0.7135(0.544-0.9356) | 0.01465 | 0.6914(0.5152-0.9279) | 0.01393 | 0.3197 | |
 | Rec |  |  | 1.012(0.7341-1.395) | 0.9416 | 0.9593(0.6786-1.356) | 0.8141 | 1 |
rs11214607 | T Allele | 589 | 674 | 1 | Â | 1 | Â | Â |
G Allele | 377 | 346 | 1.247(1.038-1.499) | 0.01845 | 1.324(1.084-1.616) | 0.005965 | 0.138 | |
TT | 177 | 225 | 1 | Â | 1 | Â | Â | |
GT | 235 | 224 | 1.3336(1.0192-1.7450) | 0.0358259 | 1.3111(0.9822-1.7501) | 0.066015 | 1 | |
GG | 71 | 61 | 1.4796(0.9969-2.1958) | 0.0517832 | 1.8187(1.1654-2.8382) | 0.00844 | 0.1932 | |
Dom | Â | Â | 1.365(1.058-1.761) | 0.01663 | 1.398(1.062-1.84) | 0.01696 | 0.391 | |
Rec | Â | Â | 1.268(0.8785-1.832) | 0.2045 | 1.53(1.022-2.292) | 0.03885 | 0.8947 | |
rs12574471 | C Allele | 831 | 873 | 1 | Â | 1 | Â | Â |
T Allele | 135 | 143 | 0.9917(0.7683-1.28) | 0.9488 | 0.9854(0.7477-1.299) | 0.9166 | 1 | |
CC | 358 | 373 | 1 | Â | 1 | Â | Â | |
CT | 115 | 127 | 0.9435(0.7052-1.2621) | 0.6950158 | 0.9483(0.6924-1.2988) | 0.740855 | 1 | |
TT | 10 | 8 | 1.3024(0.5083-3.3372) | 0.5821073 | 1.2050(0.4383-3.3130) | 0.717837 | 1 | |
Dom | Â | Â | 0.9647(0.7268-1.281) | 0.8037 | 0.9643(0.7098-1.31) | 0.8162 | 1 | |
Rec | Â | Â | 1.321(0.5171-3.376) | 0.5605 | 1.218(0.4417-3.359) | 0.703 | 1 | |
rs4274224 | A Allele | 811 | 833 | 1 | Â | 1 | Â | Â |
G Allele | 155 | 187 | 0.8478(0.6689-1.075) | 0.1723 | 0.8359(0.6466-1.081) | 0.1713 | 1 | |
AA | 338 | 339 | 1 | Â | 1 | Â | Â | |
AG | 135 | 155 | 0.8735(0.6631-1.1507) | 0.3362564 | 0.8612(0.6392-1.1602) | 0.325729 | 1 | |
GG | 10 | 16 | 0.6268(0.2805-1.4010) | 0.2550209 | 0.6131(0.2577-1.4590) | 0.268747 | 1 | |
Dom | Â | Â | 0.8505(0.6507-1.111) | 0.2356 | 0.8399(0.6288-1.122) | 0.2374 | 1 | |
Rec | Â | Â | 0.6527(0.2933-1.453) | 0.296 | 0.6246(0.2631-1.483) | 0.2862 | 1 | |
rs7131056 | C Allele | 562 | 583 | 1 | Â | 1 | Â | Â |
A Allele | 402 | 437 | 0.9565(0.8039-1.138) | 0.6159 | 0.9669(0.8009-1.167) | 0.7259 | 1 | |
CC | 166 | 177 | 1 | Â | 1 | Â | Â | |
AC | 230 | 229 | 1.0709(0.8095-1.4168) | 0.6313223 | 1.0434(0.7684-1.4168) | 0.78544 | 1 | |
AA | 86 | 104 | 0.8817(0.6179-1.2582) | 0.4877891 | 0.9131(0.6228-1.3387) | 0.64142 | 1 | |
Dom | Â | Â | 1.012(0.7788-1.315) | 0.9298 | 1.005(0.7573-1.333) | 0.9743 | 1 | |
Rec | Â | Â | 0.8478(0.6172-1.165) | 0.308 | 0.8876(0.6292-1.252) | 0.4969 | 1 | |
rs72999677 | G Allele | 679 | 730 | 1 | Â | 1 | Â | Â |
C Allele | 287 | 290 | 1.059(0.8792-1.275) | 0.5477 | 1.099(0.8983-1.343) | 0.3599 | 1 | |
GG | 245 | 273 | 1 | Â | 1 | Â | Â | |
CG | 189 | 184 | 1.14457(0.8769-1.4939) | 0.320458 | 1.1395(0.8519-1.5242) | 0.378904 | 1 | |
CC | 49 | 53 | 1.0302(0.6735-1.5758) | 0.8909049 | 1.1518(0.7287-1.8206) | 0.545185 | 1 | |
Dom | Â | Â | 1.119(0.8722-1.436) | 0.3766 | 1.143(0.8731-1.496) | 0.3307 | 1 | |
 | Rec |  |  | 0.9735(0.6461-1.467) | 0.8979 | 1.1(0.7044-1.716) | 0.6762 | 1 |