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Table 4 Multi-marker haplotype analyses

From: The μ-opioid receptor gene and smoking initiation and nicotine dependence

Marker Combination

Global P Value*

Risk Haplotype

Case Count

Case Frequency

Control Count

Control Frequency

Odds Ratio

χ2

Risk Haplotype P Value

Smoking Initiation

5-6-7

0.0022

1-2-1

321.9

0.363

149.6

0.307

1.3

4.34

0.0373

  

1-2-2

11.4

0.013

0.0

0.000

9.30

0.0023

5-6-7-8

0.0031

1-2-1-2

318.2

0.358

146.6

0.301

1.3

4.74

0.0294

  

1-2-2-2

11.7

0.013

0.0

0.000

9.66

0.0019

1-3-5-6-7

0.0035

1-1-1-2-1

282.2

0.318

124.7

0.256

1.6

4.22

0.0400

  

1-1-1-2-2

10.16

0.011

0.0

0.000

8.37

0.0038

Nicotine Dependence

5-6-7

0.0514

1-2-2

9.9

0.022

1.2

0.003

8.3

6.61

0.0102

5-6-7-8

0.0630

1-2-2-2

10.0

0.026

1.0

0.003

8.8

7.09

0.0077

  1. * The empirical p values obtained from 10,000 permutations for combinations 5-6-7, 5-6-7-8 and 1-3-5-6-7 for SI were 0.0090, 0.0114 and 0.0259 respectively.