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Table 1 Sequence similarity between human clones giving signals of differential expression and dog mRNA sequence.

From: Selection for tameness modulates the expression of heme related genes in silver foxes

  

Dog mRNA sequence

Human Clone

LOC485256

LOC480784

CN003912

DN366534

LOC477690

ID

Symbol

(HBE)

(HBB)

(HBA)

(HBZ)

(HEBP1)

242594

HBG1

88%(242) 3e-78

79%(220) 1e-37

n.s.

n.s.

n.s.

292528*

HBG2

85%(426) 7e-127

81%(386) 5e-88

n.s.

n.s.

n.s.

239611

HBE

82%(175) 2e-32

81%(176) 8e-28

n.s.

n.s.

n.s.

207558

HBA2/HBZ

n.s.

n.s.

84%(309) 8e-75

73%(213) 8e-05

n.s.

248463

HBZ

n.s.

n.s.

88%(81) 8e-20

85%(155) 4e-36

n.s.

730346

HEBP1

n.s.

n.s.

n.s.

n.s.

76%(211) 3e-16

  1. Local sequence alignment of heme related genes was carried out with BLAST (Bl2seq). Percentage identical nucleotides, number of nucleotides in alignment and e-values are listed. † = The canid hemoglobin alpha and zeta chains were retrieved from ESTs and have been annotated by comparison with human mRNA sequences. * = clone from array, sequenced in our laboratory. n.s. = no significant similarity found.