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Table 4 Haplotype frequencies from positive permutation analyses

From: The Frizzled 3 gene is associated with methamphetamine psychosis in the Japanese population

Haplotype Frequency Permutation p-values Odds ratio (95%CI)
(SNP3-4-5-6) Controls MAP Psychosis   
G-A-T-A 0.3523 0.4148 0.0889  
A-G-C-G 0.3178 0.3970 0.0246 1.42 (1.14–1.76)
G-A-T-G 0.1542 0.0243 <0.00001 0.13 (0.07–0.22)
A-A-T-G 0.0382 0.0635 0.1283  
A-G-C-A 0.0625 0.0070 0.0003 0.086 (0.03–0.24)
A-G-T-G 0.0211 0.0354 0.2791  
G-G-C-G 0.0196 0.0379 0.1678  
A-A-T-A 0.0169 0.0090 0.4565  
  1. Haplotypes with overall frequencies are less than 1% were eliminated.