Skip to main content

Table 3 Analysis of the reported allele and genotype frequencies of rs1156044 in Han Chinese and Japanese

From: Common promoter variants of the NDUFV2 gene do not confer susceptibility to schizophrenia in Han Chinese

Population and sample size

Genotype

P-valuea

Allele

P-valuea

Data source

 

A/A (%)

A/G (%)

G/G (%)

 

A (%)

G (%)

  

1. SZ-HC (n = 529)

292 (55.2)

195 (36.9)

42 (7.9)

0.023 (1 vs. 3)

779 (73.6)

279 (26.4)

0.005 (1 vs. 3)

This study

    

0.018 (1 vs. 4)

  

0.044 (1 vs. 4)

 
    

0.346 (1 vs. 5)

  

0.459 (1 vs. 5)

 

2. CT-HC (n = 505)

299 (59.2)

180 (35.6)

26 (5.2)

0.0003 (2 vs. 3)

778 (77.0)

232 (23.0)

0.0004 (2 vs. 3)

This study

    

0.001 (2 vs. 4)

  

0.001 (2 vs. 4)

 
    

0.076 (2 vs. 5)

  

0.030 (2 vs. 5)

 

3. SZ-JP (n = 212)

94 (44.3)

95 (44.8)

23 (10.8)

0.264 (3 vs. 6)

283 (66.7)

141 (33.3)

1.000 (3 vs. 6)

Washizuka et al. 2006

4. CT-JP (n = 222)

99 (44.6)

106 (47.7)

17 (7.7)

0.041 (4 vs. 6)

304 (68.5)

140 (31.5)

0.663 (4 vs. 6)

Washizuka et al. 2006

5. CT-CHB+CHD (n = 243)

123 (50.6)

103 (42.4)

17 (7.0)

0.055 (5 vs. 6)

349 (71.8)

137 (28.2)

0.187 (5 vs. 6)

HapMap dataset

6. CT-JPT (n = 113)

55 (48.7)

41 (36.3)

17 (15.0)

--

--

--

--

HapMap dataset

  1. Note: SZ-HC and CT-HC refer to Han Chinese with and without schizophrenia, respectively. CT-CHB = Beijing Han Chinese from HapMap; CHD = Chinese in Metropolitan Denver from HapMap; CT-JPT = Japanese in Tokyo from HapMap; SZ-JP and CT-JP refer to Japanese patients with and without schizophrenia from Washizuka et al. [5]. We did not include the reported Han Chinese data in Zhang et al's study [7] for comparison, as there is inconsistency about the sample size in their text. a two-tailed Fisher's Exact Probability Test P value