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Table 2 Characteristics of SNPs in RGS20 and RGS17

From: Variation in regulator of G-protein signaling 17 gene (RGS17) is associated with multiple substance dependence diagnoses

ID SNPs Chromosome Gene   Allele   
Position (hg18) Location MAF (AAs) MAF (EAs)
RGS17_1 rs9397578 153371201 RGS17 3' near gene A/G 0.27 (A) 0.26 (A)
RGS17_2 rs7750874 153372161 RGS17 3' near gene A/T 0.29 (A) 0.34 (A)
RGS17_3 rs503366 153375243 RGS17 Intron 4 C/T 0.47 (C) 0.49 (C)
RGS17_4 rs610614 153383477 RGS17 Intron 4 C/T 0.42 (C) 0.31 (C)
RGS17_5 rs545323 153387002 RGS17 Intron 4 C/T 0.05 (C) 0.33 (C)
RGS17_6 rs516557 153395551 RGS17 Intron 2 C/T 0.47 (T) 0.47 (C)
RGS17_7 rs9371276 153410854 RGS17 Intron 1 C/T 0.48 (T) 0.30 (C)
RGS17_8 rs1933258 153419500 RGS17 Intron 1 C/G 0.49 (G) 0.3 (C)
RGS17_9 rs9397585 153438568 RGS17 Intron 1 C/T 0.49 (C) 0.37 (C)
RGS17_10 rs685826 153452948 RGS17 Intron 1 C/T 0.46 (T) 0.44 (C)
RGS17_11 rs6931160 153472144 RGS17 Intron 1 C/G 0.50 (G) 0.44 (C)
RGS17_12 rs1281962 153473069 RGS17 Intron 1 C/G 0.24 (G) 0.46 (G)
RGS17_13 rs596359 153498746 RGS17 5' near gene A/G 0.33 (G) 0.48 (G)
RGS20_1 rs1384797 54956481 RGS20 intron 1 A/G 0.40 (G) 0.02 (G)
RGS20_2 rs2220093 54963880 RGS20 intron 1 A/G 0.36 (A) 0.10 (G)
RGS20_3 rs1483537 54980301 RGS20 intron 1 A/G 0.35 (G) 0.01 (G)
RGS20_4 rs7824575 54984872 RGS20 intron 1 A/G 0.24 (G) 0.27 (A)
RGS20_5 rs2128821 55006166 RGS20 intron 1 C/G 0.42 (C) 0.26 (G)
RGS20_6 rs9298496 55018233 RGS20 intron 2 C/T 0.37 (C) 0.34 (C)
RGS20_7 rs6981243 55029044 RGS20 intron 3 A/C 0.42 (A) 0.41 (C)
RGS20_8 rs7009781 55035764 RGS20 downstream C/T 0.27 (T) 0.17 (C)
  1. Chromosome positions are based on Homo sapiens chromosome 6 genomic contig NT_025741.14 (RGS17) and chromosome 8 genomic contig NT_008183.18 (RGS20). MAF (AA), minor allele frequency in our African American (AA) sample; MAF (EA), minor allele frequency in our European Americans (EA) sample.