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Table 1 Single-marker analyses between SNPs of KIAA0319 and categorical DD

From: A common haplotype of KIAA0319 contributes to the phonological awareness skill in Chinese children

rs number SNP Position Location Reference allele (Frequency) OR (95% CI) Nominal p-value
rs2143340 C/T 24659071 Intron 2 # (TDP2 gene) C (0.150) 1.38 (0.86–2.23) 0.1845
rs9461045 C/T 24649061 5′ Upstream C (0.346) 0.83 (0.57–1.21) 0.3400
rs3756821 C/T 24646821 5′ Upstream C (0.779) 1.58 (1.01–2.48) 0.0433*
rs2038137 G/T 24645943 Intron 1 G (0.847) 0.89 (0.51–1.54) 0.6743
rs2038139 A/C 24645420 Intron 1 A (0.877) 0.88 (0.49–1.57) 0.6546
rs9366577 C/T 24641328 Intron 1 C (0.046) 0.40 (0.16–1.03) 0.0459*
rs730860 A/T 24632427 Intron 1 A (0.284) 0.95 (0.62–1.46) 0.8273
rs12194307 A/T 24625562 Intron 1 A (0.896) 0.86 (0.47–1.60) 0.6393
rs9467239 C/G 24624857 Intron 1 C (0.398) 0.98 (0.69–1.41) 0.9270
rs6915373 C/T 24612902 Intron 1 C (0.540) 0.90 (0.63–1.30) 0.5806
rs5026394 A/C 24590547 Intron 3 A (0.583) 1.13 (0.78–1.64) 0.5101
rs4504469 A/G 24588884 Exon 4 A (0.129) 1.11 (0.66–1.85) 0.6961
rs9295626 C/T 24587339 Intron 4 C (0.756) 1.09 (0.73–1.61) 0.6861
rs2760135 C/T 24585547 Intron 4 C (0.438) 1.15 (0.72–1.82) 0.5583
rs2817200 A/G 24584366 Intron 4 A (0.774) 0.79 (0.50–1.24) 0.2981
rs6901322 A/T 24583804 Intron 5 Not in Hardy-Weinberg equilibrium (p < 0.1)
rs699461 A/G 24582862 Intron 5 A (0.733) 1.06 (0.72–1.56) 0.7675
rs807507 C/G 24579867 Intron 8 C (0.215) 1.15 (0.75–1.77) 0.5125
rs2760157 C/T 24578272 Intron 9 C (0.486) 0.98 (0.69–1.41) 0.9276
rs12213545 C/T 24568452 Intron 13 C (0.900) 1.10 (0.61–1.98) 0.7630
rs807540 C/T 24559029 Intron 17 C (0.551) 1.03 (0.72–1.48) 0.9263
rs9467220 C/T 24550964 Intron 20 C (0.074) 0.60 (0.29–1.23) 0.1551
rs10456306 C/T 24550041 Intron 20 C (0.243) 1.05 (0.69–1.59) 0.8312
rs807532 C/T 24549668 Intron 20 C (0.467) 0.95 (0.67–1.36) 0.7868
rs807530 C/G 24545939 UTR-3 C (0.782) 1.13 (0.76–1.68) 0.5443
  1. *Adjusted p-value from permutation test is 0.5794. #This is the only SNP located in TDP2 gene. All the others are located in KIAA0319 gene.