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Table 5 Haplotypes weighting for the probability of each haplotype ADJUSTED for age, IQ and interaction

From: Association of RGS4 variants with schizotypy and cognitive endophenotypes at the population level

   Rare (< 5%) ATAA GTGA  
Response N b se b se b se LR P-value
SPQ total score 1203 0.741 (1.290) 0.510 (0.543) 0.517 (0.895) 0.77
SPQ cognitive/perceptual factor 1203 -0.001 (0.012) 0.001 (0.005) -0.001 (0.008) 0.99
SPQ negative factor 1203 0.005 (0.013) 0.009 (0.005) 0.021* (0.009) 0.071
SPQ disorganization factor 1203 0.018 (0.021) 0.009 (0.009) 0.005 (0.015) 0.67
SPQ paranoid factor 1203 0.003 (0.019) -0.001 (0.008) -0.007 (0.014) 0.95
d'-S2B (spatial working memory) 1462 0.124 (0.085) 0.018 (0.036) 0.135* (0.059) 0.077
d'-V2B (verbal working memory) 1394 0.053 (0.073) -0.004 (0.032) 0.017 (0.051) 0.87
Antisaccade error rate 1622 -0.025 (0.019) 0.008 (0.008) 0.002 (0.013) 0.35
  1. The reference haplotype is GGGG. Shown are the coefficients of a regression model/copy of the corresponding haplotype. b, coefficient, expressing change in the response variable/haplotype copy; SE, standard error of the coefficient b; LR p value, p value for a likelihood ratio test against a constant-only model;
  2. * significantly different (p < 0.05) from the reference haplotype GGGG (the most common in the population).