Table 1 Results of the association analyses
From: Association of CTXN3-SLC12A2 polymorphisms and schizophrenia in a Thai population
dbSNP ID | Type of SNP | Genotype frequencies | MAF1 | P 2 | Allelic OR3 Generalized OR | ||||
|---|---|---|---|---|---|---|---|---|---|
rs7711139 | CTXN3 | A/A | A/G | G/G | a | 0.139 | 1.29(0.96–1.74) | ||
intronic | Patients | 17 | 45 | 52 | 0.34 | d | 0.528 | 1.23(0.84–1.95) | |
Controls | 13 | 74 | 85 | 0.29 | r | 0.047 | |||
rs248707 | CTXN3 | C/C | C/T | T/T | a | 0.594 | 1.24(0.88–1.74) | ||
3′UTR | Patients | 7 | 40 | 67 | 0.24 | d | 0.325 | 1.27(0.80–2.00) | |
Controls | 8 | 53 | 111 | 0.20 | r | 0.580 | |||
rs1421746 | Intergenic | C/C | C/T | T/T | a | 0.025 | 0.61(0.46–0.81) | ||
Patients | 37 | 49 | 26 | 0.45 | d | 0.038 | 0.58(0.39–0.86) | ||
Controls | 38 | 71 | 64 | 0.57 | r | 0.015 | |||
rs698172 | Intergenic | C/C | C/T | T/T | a | 0.012 | 0.61(0.46–0.82) | ||
Patients | 49 | 41 | 21 | 0.38 | d | 0.003* | 0.58(0.38–0.87) | ||
Controls | 47 | 81 | 45 | 0.49 | r | 0.167 | |||
rs698171 | Intergenic | G/G | G/T | T/T | a | 0.028 | 1.56(1.13–2.16) | ||
Patients | 57 | 44 | 11 | 0.29 | d | 0.10 | 1.58(1.01–2.48) | ||
Controls | 105 | 63 | 5 | 0.21 | r | 0.01 | |||
rs245201 | Intergenic | A/A | A/G | G/G | a | 0.083 | 0.81(0.60–1.08) | ||
Patients | 51 | 41 | 22 | 0.37 | d | 0.052 | 0.77(0.51–1.15) | ||
Controls | 56 | 82 | 30 | 0.42 | r | 0.759 | |||
rs245178 | Intergenic | A/A | A/G | G/G | a | 0.021 | 0.62(0.46–0.83) | ||
Patients | 54 | 43 | 15 | 0.33 | d | 0.006* | 0.57(0.38–0.86) | ||
Controls | 55 | 83 | 34 | 0.44 | r | 0.165 | |||